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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_241040_281567_R

Intron Information:

Intron Rank:

144887

Intron Class:

major

Intron Phase:

Intron Coordinates:

241040 - 281567

Intron Length:

40528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CTGCACATAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

77.3

37.6

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

80.1

0.68

0.8

78.1

Minor 5ss

42.1

-0.9

2.9

59.1

Minor BPS

49.5

-0

1.9

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025331

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034662

240357 - 281775

41419