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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_30587_40159_F

Intron Information:

Intron Rank:

132732

Intron Class:

major

Intron Phase:

Intron Coordinates:

30587 - 40159

Intron Length:

9573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTATGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTATCCTGACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

81.3

33.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

71.5

0.48

0.9

64.7

36.3

Minor 5ss

42.8

-0.8

3.4

61.3

44.6

Minor BPS

47.6

-0.3

1.9

54.49

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021346

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047108

30089 - 40754

10666