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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_325954_328551_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

325954 - 328551

Intron Length:

2598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTTAATGCA

5'SS Class:

weak_major

3'SS Sequence:

GGTAGTAAAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TTGGTAGTAAAA

Flanking Amino Acid:

KISPGTEDEISVHAANFSLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.2

54.5

36.6

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

42.2

-0.4

1.7

36.9

43.2

Minor 5ss

30.9

-2.2

3.1

39.5

39.8

Minor BPS

42.4

-0.5

2.3

56.86

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024060

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038088

325787 - 328609

2823