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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_330440_335083_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

330440 - 335083

Intron Length:

4644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCGCCCTGACCG

Flanking Amino Acid:

SLFLLTQTMQKMAPTCLRPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.4

32.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.58

0.8

30.9

Minor 5ss

29.8

-2.3

3.1

40.6

45.6

Minor BPS

45.9

-0.4

1.8

46.43

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006165

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040645

329339 - 349573

20235

ENSAPLT00000006409

328875 - 349573

20699