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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_335192_338107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

335192 - 338107

Intron Length:

2916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTTTCTTAAAT

Flanking Amino Acid:

LPLPVTVPTREAKCAYIIII

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

82.2

0.8

71.9

35.8

Major PPT

75.7

0.58

68.9

41.6

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

84.8

1.17

1.1

97.05

26.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006165

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040645

329339 - 349573

20235

ENSAPLT00000006409

328875 - 349573

20699