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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_338237_339531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

338237 - 339531

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGGAAT

5'SS Class:

major

3'SS Sequence:

CTCTGTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTACAT

U12 Branch Point Sequence:

GGTCCCTGACCT

Flanking Amino Acid:

PLLGVQSSKSVCLQYLNDTN

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

72.7

38.2

Major BPS

52.4

0.06

1.3

62.9

43.3

Major PPT

0.72

0.8

75.5

33.1

Minor 5ss

36.1

-1.6

3.3

54.2

43.9

Minor BPS

54.1

0.21

1.8

72.55

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006165

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040645

329339 - 349573

20235

ENSAPLT00000006409

328875 - 349573

20699