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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_344233_344764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

344233 - 344764

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTTTCTTAAAG

Flanking Amino Acid:

LWLQCSFMGLNFKKSWGCGT

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

86.3

Major BPS

84.4

0.85

34.5

Major PPT

0.7

82.3

Minor 5ss

49.5

-0

2.5

68.8

35.6

Minor BPS

77.9

0.74

1.4

80.39

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006165

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040645

329339 - 349573

20235

ENSAPLT00000006409

328875 - 349573

20699