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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_346285_347511_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

346285 - 347511

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTATGTTCT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTCTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TAAGCCTCATCA

Flanking Amino Acid:

GGFALADASANSGLSAWLGH

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

68.2

37.5

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

87.4

0.84

0.8

88.7

28.3

Minor 5ss

0.14

2.3

73.4

36.6

Minor BPS

49.2

-0

1.9

61.97

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006165

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006409

328875 - 349573

20699

ENSAPLT00000040645

329339 - 349573

20235