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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_347674_348565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

347674 - 348565

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

CATTACACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATTACAC

Flanking Amino Acid:

TLFLPVFSSMAASVKIHPLY

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

79.6

29.4

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

71.3

0.48

0.9

63.5

37.4

Minor 5ss

41.7

-0.9

3.1

53.2

Minor BPS

53.1

0.08

68.75

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006165

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040645

329339 - 349573

20235

ENSAPLT00000006409

328875 - 349573

20699