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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_444215_450609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

444215 - 450609

Intron Length:

6395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTTCCTGATGA

Flanking Amino Acid:

ICSAAFSLVSNLNPYSYDES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

77.8

33.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

0.74

0.7

81.8

30.3

Minor 5ss

49.1

-0.1

2.8

64.7

Minor BPS

57.9

0.24

76.27

40.9

Associated Gene:

Gene:

PITPNM3

Ensembl Gene ID:

ENSAPLG00000006762

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007045

440255 - 484004

43750