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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_47187_52009_F

Intron Information:

Intron Rank:

134972

Intron Class:

major

Intron Phase:

Intron Coordinates:

47187 - 52009

Intron Length:

4823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

AAATGTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.8

39.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.6

0.8

0.9

80.6

Minor 5ss

33.3

-1.9

3.3

48.8

Minor BPS

51.1

0.12

1.7

66.24

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022614

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023100

47091 - 53455

6365