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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_489522_491854_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

489522 - 491854

Intron Length:

2333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TAGACTTCAAGC

Flanking Amino Acid:

ALDDGIEQEEREHAISIYYC

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.8

27.8

Major BPS

76.8

0.67

0.9

75.9

Major PPT

86.2

0.82

0.7

81.2

30.8

Minor 5ss

37.7

-1.4

2.9

52.3

44.3

Minor BPS

47.6

-0.2

1.8

56.38

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007017

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007271

488862 - 503304

14443