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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_499619_500655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

499619 - 500655

Intron Length:

1037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTCAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTCTTTTTCAAG

Flanking Amino Acid:

LLPAYCHVLQKLTLEVNNDH

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

76.8

0.67

0.9

75.9

Major PPT

83.1

0.74

0.9

82.8

32.6

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

-0.2

1.9

59.29

43.1

Associated Gene:

Gene:

FBXO39

Ensembl Gene ID:

ENSAPLG00000007018

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007277

498605 - 501718

3114