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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_504176_506187_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

504176 - 506187

Intron Length:

2012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GAATCTCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTATTTTGAATC

Flanking Amino Acid:

YADNAVKIEGNFISPEDWTD

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

74.5

0.55

0.9

70.2

40.8

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

64.1

0.42

1.3

71.42

33.7

Associated Gene:

Gene:

TEKT1

Ensembl Gene ID:

ENSAPLG00000007024

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007304

502607 - 508032

5426