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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_507315_507697_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
507315 - 507697

Intron Length:
383

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAATCCCA

5'SS Class:
major

3'SS Sequence:
TTCCATTCTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
ATGTTTGTAACT

Flanking Amino Acid:
KTQSDVNKKIEQRLEEIKFW

Intron Amino Acid Position:
88

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
64.4
41.6

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
82.2
0.72
0.8
76.8
31.5

Minor 5ss
38.2
-1.3
3
49.2
46.5

Minor BPS
57.9
0.32
2
77.17
40

Associated Gene:

Gene:
TEKT1

Ensembl Gene ID:

Chromosome:
PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

502607 - 508032
5426