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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_514094_519918_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

514094 - 519918

Intron Length:

5825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

ATTATTACTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

ATCTCTTTTATT

Flanking Amino Acid:

QNFELAFTMAEKMAHCDRLI

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

35.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

77.6

0.62

0.9

70.7

39.2

Minor 5ss

36.1

-1.6

2.8

42.3

38.4

Minor BPS

64.1

0.52

1.6

77.58

39.2

Associated Gene:

Gene:

SMTNL2

Ensembl Gene ID:

ENSAPLG00000025272

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036274

510809 - 535695

24887