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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_522280_523679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

522280 - 523679

Intron Length:

1400

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAGGCATT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTCTTTAACC

Flanking Amino Acid:

GMSSGTKAGERAADSYCDVT

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

84.4

33.5

Major BPS

100

1.24

0.5

100

Major PPT

83.6

0.76

0.8

78.1

35.4

Minor 5ss

33.6

-1.9

4.3

56.4

Minor BPS

87.1

1.14

0.9

88.77

25.9

Associated Gene:

Gene:

SMTNL2

Ensembl Gene ID:

ENSAPLG00000025272

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036274

510809 - 535695

24887