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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_525352_526022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

525352 - 526022

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TCCTTTGTATTT

Flanking Amino Acid:

EMVLKTSSQSVKAWNSSTLR

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

86.4

0.82

0.8

84.4

30.5

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

44.8

-0.3

2.1

61.8

43.8

Associated Gene:

Gene:

SMTNL2

Ensembl Gene ID:

ENSAPLG00000025272

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036274

510809 - 535695

24887