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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_526251_526757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

526251 - 526757

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTCACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

IIENGHQSSSGQPNVSRELT

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.9

0.7

0.9

39.5

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

SMTNL2

Ensembl Gene ID:

ENSAPLG00000025272

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036274

510809 - 535695

24887