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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_526846_535281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

526846 - 535281

Intron Length:

8436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTCCTCTGACA

Flanking Amino Acid:

AKLAVAGRSQSVDLDDHHKP

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

29.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.6

0.67

0.9

76.3

32.4

Minor 5ss

-1.5

3.3

50.9

39.6

Minor BPS

62.2

0.38

1.6

76.92

33.2

Associated Gene:

Gene:

SMTNL2

Ensembl Gene ID:

ENSAPLG00000025272

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036274

510809 - 535695

24887