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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_6672_9164_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6672 - 9164

Intron Length:

2493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGAGAT

U12 Branch Point Sequence:

TTCGGTTGGACA

Flanking Amino Acid:

MMDFLRGLLSAEFFEMLEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

46.1

-0.2

1.2

38.2

41.7

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

45.3

-0.3

58.17

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005197

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043527

6645 - 22036

15392

ENSAPLT00000021154

6645 - 23014

16370

ENSAPLT00000005432

6645 - 23369

16725