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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000237.1_118558_121749_F

Intron Information:

Intron Rank:

147989

Intron Class:

major

Intron Phase:

Intron Coordinates:

118558 - 121749

Intron Length:

3192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTGCTTTCTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.5

0.69

0.8

73.8

36.9

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

43.5

-0.4

3.6

79.06

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029679

Chromosome:

PEDO01000237.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025970

49337 - 122026

72690