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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000237.1_200288_205677_R

Intron Information:

Intron Rank:

149911

Intron Class:

major

Intron Phase:

Intron Coordinates:

200288 - 205677

Intron Length:

5390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

78.9

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

36.6

-1.5

3.3

50.4

39.9

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028215

Chromosome:

PEDO01000237.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035751

193222 - 206126

12905