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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_11110_11889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11110 - 11889

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGAATCT

5'SS Class:

major

3'SS Sequence:

CCTGTGTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CTGGCCATGACC

Flanking Amino Acid:

EGEIPGNPNKGSSLQEVVVA

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

64.5

36.1

Major BPS

0.72

38.9

Major PPT

72.1

0.5

0.9

68.6

37.3

Minor 5ss

33.1

-1.9

3.4

47.8

47.9

Minor BPS

51.5

0.03

1.8

62.35

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007625

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007902

10544 - 14381

3838