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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_138776_139645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138776 - 139645

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTGCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAA

U12 Branch Point Sequence:

TCTTTTTGCACA

Flanking Amino Acid:

ILQNFNKYTRVPTGGYTSIN

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.3

Major BPS

65.8

0.39

73.3

31.3

Major PPT

82.4

0.73

0.8

79.1

32.9

Minor 5ss

36.6

-1.5

3.2

39.6

45.9

Minor BPS

50.4

1.9

40.1

Associated Gene:

Gene:

MAN1B1

Ensembl Gene ID:

ENSAPLG00000006155

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042863

128620 - 155548

26929

ENSAPLT00000006394

112120 - 155548

43429