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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_162341_163123_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

162341 - 163123

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGACCTTC

5'SS Class:

weak_minor

3'SS Sequence:

TTCTCTTCTTCAG|T

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

AAGAAGTTAATC

Flanking Amino Acid:

RIPEKLRCASFLSGTEDPPA

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.3

0.08

1.2

54.9

39.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

89.7

0.89

0.6

88.5

21.1

Minor 5ss

53.9

0.13

2.7

73.2

37.7

Minor BPS

44.5

-0.4

2.1

51.74

39.2

Associated Gene:

Gene:

UAP1L1

Ensembl Gene ID:

ENSAPLG00000005633

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005845

162220 - 176687

14468