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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_166245_166292_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

166245 - 166292

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGCCCAG

5'SS Class:

weak_major

3'SS Sequence:

CTGTGCATCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TCCAGCAGAACT

Flanking Amino Acid:

HFFTVEFLQMKFVFASFLLT

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

39.4

42.4

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

68.2

0.41

58.5

41.9

Minor 5ss

36.1

-1.6

3.3

46.5

Minor BPS

44.1

-0.3

2.1

62.41

Associated Gene:

Gene:

UAP1L1

Ensembl Gene ID:

ENSAPLG00000005633

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005845

162220 - 176687

14468