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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_166479_167379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

166479 - 167379

Intron Length:

901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CTTGTCATAGTC

Flanking Amino Acid:

VTKGADCGAKVVEKAYPTEP

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

75.6

0.58

0.9

68.7

37.2

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

46.1

-0.3

1.9

58.2

41.5

Associated Gene:

Gene:

UAP1L1

Ensembl Gene ID:

ENSAPLG00000005633

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005845

162220 - 176687

14468