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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_167553_168772_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

167553 - 168772

Intron Length:

1220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCTGC

5'SS Class:

weak_major

3'SS Sequence:

TCTTGCATTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

TTCTCTTGCATT

Flanking Amino Acid:

EEKGKIAMAPDGNGGLYRAL

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.3

55.2

45.1

Major BPS

67.7

0.44

58.3

38.4

Major PPT

0.59

0.9

69.8

35.4

Minor 5ss

48.7

-0.1

2.9

68.4

42.5

Minor BPS

0.21

1.9

76.06

41.4

Associated Gene:

Gene:

UAP1L1

Ensembl Gene ID:

ENSAPLG00000005633

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005845

162220 - 176687

14468