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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_39676_42110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39676 - 42110

Intron Length:

2435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

GTTTGCCCAACA

Flanking Amino Acid:

AGDPGFPGPKGTKGEPGFPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

81.2

33.8

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

69.5

0.44

63.2

38.4

Minor 5ss

41.3

-1

58.7

45.8

Minor BPS

48.6

-0.1

2.3

69.53

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007558

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007848

34708 - 48503

13796