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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_45780_47129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45780 - 47129

Intron Length:

1350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TACTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

TAACTGTGAACT

Flanking Amino Acid:

VLGDFLGGNAGDSLSYHKDM

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

76.9

0.61

0.8

70.2

30.3

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

47.8

-0

2.1

68.44

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007558

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007848

34708 - 48503

13796