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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000239.1_46500_59021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46500 - 59021

Intron Length:

12522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGATTC

5'SS Class:

major

3'SS Sequence:

CTTGTTTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATAAATC

Flanking Amino Acid:

VMDLAASCCRVSSLVIEKRS

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

34.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.1

0.5

0.9

65.9

Minor 5ss

36.6

-1.5

3.2

42.5

44.6

Minor BPS

58.4

0.24

1.9

74.76

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007334

Chromosome:

PEDO01000239.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021740

45299 - 70257

24959