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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000240.1_136021_137092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

136021 - 137092

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTTCTCACAAAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

36.6

Major BPS

0.87

0.8

85.6

Major PPT

74.7

0.56

0.8

73.1

31.8

Minor 5ss

37.6

-1.4

3.2

50.9

45.7

Minor BPS

48.3

-0.1

1.9

66.59

38.1

Associated Gene:

Gene:

STS

Ensembl Gene ID:

ENSAPLG00000009954

Chromosome:

PEDO01000240.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022270

135922 - 239448

103527