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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000240.1_155370_159478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155370 - 159478

Intron Length:

4109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CTCTCTTTATAG

Flanking Amino Acid:

KQRGYATALIGKWHLGMNCE

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

80.8

0.69

0.7

75.6

26.6

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

50.2

-0.1

1.8

55.79

45.8

Associated Gene:

Gene:

STS

Ensembl Gene ID:

ENSAPLG00000009954

Chromosome:

PEDO01000240.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023083

126046 - 239448

113403

ENSAPLT00000022270

135922 - 239448

103527

ENSAPLT00000021443

125660 - 239448

113789

ENSAPLT00000010370

125398 - 239448

114051

ENSAPLT00000033989

126046 - 239448

113403