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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000240.1_192187_202037_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

192187 - 202037

Intron Length:

9851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAACTTT

5'SS Class:

major

3'SS Sequence:

ACAACACGTTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

ATTCTCTTATCA

Flanking Amino Acid:

VHGGYNGIYKGGKSTNWEGG

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

0.9

77.2

33.9

Major BPS

0.72

80.3

31.7

Major PPT

57.2

0.16

1.1

51.7

42.1

Minor 5ss

43.7

-0.7

3.2

64.1

47.4

Minor BPS

65.2

0.47

1.6

75.01

36.1

Associated Gene:

Gene:

STS

Ensembl Gene ID:

ENSAPLG00000009954

Chromosome:

PEDO01000240.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010370

125398 - 239448

114051

ENSAPLT00000023083

126046 - 239448

113403

ENSAPLT00000022270

135922 - 239448

103527

ENSAPLT00000021443

125660 - 239448

113789