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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000240.1_47248_87584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47248 - 87584

Intron Length:

40337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

RFHPPAAPEKCLVFEDSPLG

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

85.4

0.8

83.9

31.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

PUDP

Ensembl Gene ID:

ENSAPLG00000009897

Chromosome:

PEDO01000240.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030494

46286 - 125639

79354

ENSAPLT00000010297

46286 - 125639

79354