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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000240.1_484697_485330_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

484697 - 485330

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTGCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATTGTTGACA

Flanking Amino Acid:

YVKLAKQDIMLFLTDFYRSI

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.4

Major BPS

100

1.24

0.5

100

Major PPT

60.3

0.23

1.2

60.1

40.7

Minor 5ss

34.3

-1.8

2.8

37.6

42.2

Minor BPS

53.1

0.09

2.1

66.12

40.7

Associated Gene:

Gene:

PNPLA4

Ensembl Gene ID:

ENSAPLG00000010047

Chromosome:

PEDO01000240.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042157

481239 - 503981

22743

ENSAPLT00000040397

483529 - 503981

20453

ENSAPLT00000010468

481239 - 502848

21610