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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000240.1_498766_502721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

498766 - 502721

Intron Length:

3956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTAAAA

5'SS Class:

major

3'SS Sequence:

CTTCTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TTCTTTTTTAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

71.5

33.3

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

81.2

0.7

0.9

86.2

25.3

Minor 5ss

38.9

-1.2

2.8

48.9

46.9

Minor BPS

49.7

-0.1

1.8

59.4

42.6

Associated Gene:

Gene:

PNPLA4

Ensembl Gene ID:

ENSAPLG00000010047

Chromosome:

PEDO01000240.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010468

481239 - 502848

21610