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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000240.1_87815_125380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87815 - 125380

Intron Length:

37566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGTGTAGC

5'SS Class:

major

3'SS Sequence:

ATTTGTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATACATATAATG

Flanking Amino Acid:

LIFDMDGLLLGVDKLIRHLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

64.9

41.2

Major BPS

0.72

78.4

31.2

Major PPT

83.9

0.76

0.8

77.8

Minor 5ss

36.3

-1.6

2.6

36.5

40.8

Minor BPS

45.5

-0.4

1.7

50.35

37.3

Associated Gene:

Gene:

PUDP

Ensembl Gene ID:

ENSAPLG00000009897

Chromosome:

PEDO01000240.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030494

46286 - 125639

79354