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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000259.1_2244_2395_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2244 - 2395

Intron Length:
152

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGCAGC

5'SS Class:
strong_major

3'SS Sequence:
TTTCCTCCCTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GACTCAT

U12 Branch Point Sequence:
AGGGACTCATTT

Flanking Amino Acid:
CFWGHDQVAEDLVGNGALVS

Intron Amino Acid Position:
166

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.8
0.82
0.9
72.2
39.5

Major BPS
69.4
0.48
1.2
71.6
36.4

Major PPT
83.1
0.74
0.7
81.4
23.6

Minor 5ss
34.3
-1.8
2.9
43
44.2

Minor BPS
41.1
-0.6
1.9
52.27
42.6

Associated Gene:

Gene:
ILK

Ensembl Gene ID:

Chromosome:
PEDO01000259.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 5360
5340

21 - 5360
5340