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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000259.1_785_1767_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
785 - 1767

Intron Length:
983

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTGAGCAGG

5'SS Class:
major

3'SS Sequence:
GCCCTCTCTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAC

U12 Branch Point Sequence:
AGAACCCTCACT

Flanking Amino Acid:
LDNTENDLNQGDDHGFSPLH

Intron Amino Acid Position:
78

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.1
59.7
46.7

Major BPS
60.1
0.25
1.1
62.9
34.3

Major PPT
76.3
0.59
0.8
72.7
32.1

Minor 5ss
32.9
-2
2.8
31.4
42.5

Minor BPS
47.2
-0.1
2.1
66.16
43.5

Associated Gene:

Gene:
ILK

Ensembl Gene ID:

Chromosome:
PEDO01000259.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 5360
5340

21 - 5360
5340

21 - 5360
5340