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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000291.1_11587_11975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11587 - 11975

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAC

U12 Branch Point Sequence:

CTTCCCGTCACG

Flanking Amino Acid:

VRQLLFTSGLGGMRPNTLVL

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.1

42.1

Major BPS

1.2

54.6

40.8

Major PPT

73.2

0.52

69.6

41.6

Minor 5ss

34.6

-1.7

2.8

45.3

Minor BPS

-0.3

2.5

60.35

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027976

Chromosome:

PEDO01000291.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046963

9890 - 13500

3611