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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000291.1_12123_12981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12123 - 12981

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGGTC

5'SS Class:

major

3'SS Sequence:

TCTCCCCACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

CTCTCCCCACCC

Flanking Amino Acid:

VLGHVELQDLDALPSDPLQP

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

67.3

38.4

Major BPS

0.27

1.3

53.3

44.2

Major PPT

70.5

0.46

0.9

62.2

33.6

Minor 5ss

27.9

-2.5

3.5

32.4

42.7

Minor BPS

45.5

-0.3

2.1

59.17

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027976

Chromosome:

PEDO01000291.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046963

9890 - 13500

3611