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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000291.1_5336_5454_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5336 - 5454

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TCCCCCCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCCCCCTCACCC

Flanking Amino Acid:

QPTLYDPEFPQSLNYGGIGT

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

66.3

39.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

59.1

0.21

0.9

56.1

27.8

Minor 5ss

-1.9

3.3

45.7

43.5

Minor BPS

49.1

-0

1.9

59.94

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014500

Chromosome:

PEDO01000291.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015136

52 - 6315

6264