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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000291.1_5523_5613_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5523 - 5613

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTGCTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGGCAC

U12 Branch Point Sequence:

TCCCTCGGCACC

Flanking Amino Acid:

HELTHGYDDWGGQYDRHGNL

Intron Amino Acid Position:

608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

71.9

33.8

Major BPS

-0.3

1.5

44.3

Major PPT

0.45

62.2

39.8

Minor 5ss

27.1

-2.6

26.1

Minor BPS

38.4

-0.9

2.3

47.43

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014500

Chromosome:

PEDO01000291.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015136

52 - 6315

6264