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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000312.1_1018_2432_R

Intron Information:

Intron Rank:

132241

Intron Class:

major

Intron Phase:

Intron Coordinates:

1018 - 2432

Intron Length:

1415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TTGTGCTTACTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

86.8

0.83

0.6

81.3

30.7

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

51.7

-0

2.1

62.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018408

Chromosome:

PEDO01000312.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041668

55 - 2726

2672