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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000315.1_4116_4731_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4116 - 4731

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATCCGGC

5'SS Class:

weak_major

3'SS Sequence:

ACGGGCCCGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGCAC

U12 Branch Point Sequence:

TTTTCCTTAGCA

Flanking Amino Acid:

QTFVSCQQQRLVYLPPPWGD

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.3

43.6

Major BPS

53.4

0.08

1.4

65.7

Major PPT

0.02

1.1

43.5

38.2

Minor 5ss

47.9

-0.2

58.8

46.1

Minor BPS

83.4

1.04

1.4

91.7

29.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024227

Chromosome:

PEDO01000315.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019411

1955 - 7678

5724