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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000315.1_4433_12056_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4433 - 12056

Intron Length:

7624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGGG

5'SS Class:

major

3'SS Sequence:

CGCCTAAATTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

AACGCCTAAATT

Flanking Amino Acid:

VVLQGGRVAEVPGVGVSMCA

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

45.2

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

59.4

0.21

55.9

38.2

Minor 5ss

28.9

-2.4

3.5

37.3

47.4

Minor BPS

53.6

0.19

1.8

66.95

44.3

Associated Gene:

Gene:

ABCB8

Ensembl Gene ID:

ENSAPLG00000022316

Chromosome:

PEDO01000315.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027165

4130 - 16730

12601