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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000315.1_4860_4931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4860 - 4931

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CGCTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAT

U12 Branch Point Sequence:

AGACCCTGCATA

Flanking Amino Acid:

EEYLPVWGDTDETSYEAGVK

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

50.1

1.4

43.2

Major PPT

72.8

0.51

0.9

36.3

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

45.8

-0.3

1.8

54.27

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024227

Chromosome:

PEDO01000315.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019411

1955 - 7678

5724