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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000315.1_5365_12028_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5365 - 12028

Intron Length:

6664

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGGGGCAA

5'SS Class:

major

3'SS Sequence:

GGTTGTAGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTGTAG

U12 Branch Point Sequence:

TCTCGCCCACCC

Flanking Amino Acid:

EVGGAGGGVKAWGLQHRGAS

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.2

49.2

39.8

Major BPS

-0.5

1.8

43.1

49.2

Major PPT

0.14

1.2

46.9

Minor 5ss

12.5

-4.3

3.5

10.8

28.4

Minor BPS

-0.8

2.3

52.82

44.5

Associated Gene:

Gene:

ABCB8

Ensembl Gene ID:

ENSAPLG00000022316

Chromosome:

PEDO01000315.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039338

5105 - 15525

10421